Phillip Doerfler

Associate Investigator at the Versiti Blood Research Institute and Assistant Professor at the Medical College of Wisconsin



Department of Hematopoiesis and Immunology

Versiti Blood Research Institute



Chromothripsis as an on-target consequence of CRISPR-Cas9 genome editing


Journal article


Mitchell L. Leibowitz, Stamatis Papathanasiou, Phillip A. Doerfler, Logan J. Blaine, Lili Sun, Yu Yao, Cheng-Zhong Zhang, M. Weiss, D. Pellman
Nature Genetics, 2020

Semantic Scholar DOI PubMedCentral PubMed
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APA   Click to copy
Leibowitz, M. L., Papathanasiou, S., Doerfler, P. A., Blaine, L. J., Sun, L., Yao, Y., … Pellman, D. (2020). Chromothripsis as an on-target consequence of CRISPR-Cas9 genome editing. Nature Genetics.


Chicago/Turabian   Click to copy
Leibowitz, Mitchell L., Stamatis Papathanasiou, Phillip A. Doerfler, Logan J. Blaine, Lili Sun, Yu Yao, Cheng-Zhong Zhang, M. Weiss, and D. Pellman. “Chromothripsis as an on-Target Consequence of CRISPR-Cas9 Genome Editing.” Nature Genetics (2020).


MLA   Click to copy
Leibowitz, Mitchell L., et al. “Chromothripsis as an on-Target Consequence of CRISPR-Cas9 Genome Editing.” Nature Genetics, 2020.


BibTeX   Click to copy

@article{mitchell2020a,
  title = {Chromothripsis as an on-target consequence of CRISPR-Cas9 genome editing},
  year = {2020},
  journal = {Nature Genetics},
  author = {Leibowitz, Mitchell L. and Papathanasiou, Stamatis and Doerfler, Phillip A. and Blaine, Logan J. and Sun, Lili and Yao, Yu and Zhang, Cheng-Zhong and Weiss, M. and Pellman, D.}
}

Abstract

Genome editing has therapeutic potential for treating genetic diseases and cancer. However, the currently most practicable approaches rely on the generation of DNA double-strand breaks (DSBs), which can give rise to a poorly characterized spectrum of chromosome structural abnormalities. Here, using model cells and single-cell whole-genome sequencing, as well as by editing at a clinically relevant locus in clinically relevant cells, we show that CRISPR–Cas9 editing generates structural defects of the nucleus, micronuclei and chromosome bridges, which initiate a mutational process called chromothripsis. Chromothripsis is extensive chromosome rearrangement restricted to one or a few chromosomes that can cause human congenital disease and cancer. These results demonstrate that chromothripsis is a previously unappreciated on-target consequence of CRISPR–Cas9-generated DSBs. As genome editing is implemented in the clinic, the potential for extensive chromosomal rearrangements should be considered and monitored. Chromothripsis, a chromosomal shattering event, can be elicited by micronuclei and chromosome bridges formed by CRISPR–Cas9-generated double-stranded breaks. Extensive chromosomal rearrangements may thus be an on-target effect of genome editing.


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